Originally, I had planned to simply post the list with addresses and telephone numbers on Orthogonal Thought, but Dave Lu (from Fanpop) suggested that I insert a Google Map to show locations. I ended up with what you see below. Just click on one of the restaurant names and the map will recenter and zoom in on the restaurant you selected.
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Click on a restaurant for details
3 stars 


French Laundry
2 stars

Aqua
Cyrus
Manresa
Michael Mina
1 star
Acquerello
Auberge du Soleil
Bistro Jeanty
Bouchon
Boulevard
Bushi-Tei
Chez Panisse
Chez TJ
Dining Room at the Ritz-Carlton
Dry Creek Kitchen
Farmhouse Inn & Restaurant
Fifth Floor
Fleur de Lys
Gary Danko
K&L Bistro
La Folie
La Toque
Masa's
Quince
Range
Rubicon
Sushi Ran
Terra
French Laundry
2 stars
Aqua
Cyrus
Manresa
Michael Mina
1 star
Acquerello
Auberge du Soleil
Bistro Jeanty
Bouchon
Boulevard
Bushi-Tei
Chez Panisse
Chez TJ
Dining Room at the Ritz-Carlton
Dry Creek Kitchen
Farmhouse Inn & Restaurant
Fifth Floor
Fleur de Lys
Gary Danko
K&L Bistro
La Folie
La Toque
Masa's
Quince
Range
Rubicon
Sushi Ran
Terra
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Other great places we ate; Zuni Cafe, Kokkari, Jardiniere.
Gary Danko and Boulevard, in contrast are relative bargains (imho).
But despite Aqua's price tag (and really, I think it's reasonably priced compared to some of its peers), it really is a solid contender for best restaurant in SF (Danko is great too).
Oh, and Kokkari is a wonderful restaurant. Glad you ate at some good places on your visit.